• META-pipe cloud setup and execution 

      Agafonov, Aleksander; Mattila, Kimmo; Tuan, Cuong Duong; Tiede, Lars; Raknes, Inge Alexander; Bongo, Lars Ailo Aslaksen (Journal article; Tidsskriftartikkel; Peer reviewed, 2018-01-18)
      META-pipe is a complete service for the analysis of marine metagenomic data. It provides assembly of high-throughput sequence data, functional annotation of predicted genes, and taxonomic profiling. The functional annotation is computationally demanding and is therefore currently run on a high-performance computing cluster in Norway. However, additional compute resources are necessary to open the ...