Viser treff 281-300 av 931

    • DnoisE: distance denoising by entropy. An open-source parallelizable alternative for denoising sequence datasets 

      Antich, Adrià; Palacín, Creu; Turon, Xavier (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-01-19)
      DNA metabarcoding is broadly used in biodiversity studies encompassing a wide range of organisms. Erroneous amplicons, generated during amplification and sequencing procedures, constitute one of the major sources of concern for the interpretation of metabarcoding results. Several denoising programs have been implemented to detect and eliminate these errors. However, almost all denoising software ...
    • Sex steroid dynamics and mRNA transcript profiles of growth- and development-related genes during embryogenesis following induced follicular maturation in European eel 

      Kottmann, Johanna S.; Tveiten, Helge; Miest, Joanna J.; Tomkiewicz, Jonna (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-09-15)
      Hormones and mRNA transcripts of maternal origin deposited in the egg may affect early embryonic development in oviparous species. These hormones include steroids, such as estradiol-17β (E2), testosterone (T), 11-ketotestosterone (11-kt), 17α,20ß-dihydroxy-4-pregnen-3-one (DHP), and cortisol, which also play an important role in fish reproduction. In European eel, <i>Anguilla anguilla</i>, which ...
    • Do we choose differently after a discussion? Results from a deliberative valuation study in Ireland 

      Aanesen, Margrethe; Armstrong, Claire W.; Van Rensburg, Tom M. (Journal article; Tidsskriftartikkel; Peer reviewed, 2021)
      A criticism against individual-based stated preference surveys is that people seldom make choices in social isolation. An approach used in response to this is deliberative valuation. We conduct a series of valuation workshops including a choice experiment. This involves providing respondents with information and opportunity to discuss. They made their choices individually both before and after the ...
    • Pulling mechanisms and pushing strategies: How to improve Ecosystem Advice Fisheries Management advice within the European Union’s Common Fisheries Policy 

      Ramirez-Monsalve, Paulina; Nielsen, Kåre Nolde; Ballesteros, Marta; Kirkfeldt, Trine; Dickey-Collas, Mark; Delaney, Alyne; Hegland, Troels Jacob; Raakjær, Jesper; Degnbol, Poul (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-09-17)
      While European policies have progressed towards an Ecosystem Approach to Fisheries Management (EAFM), limited attention has been paid to the implications for its advisory system. This paper analyses the advisory landscape in the European Union (EU) by addressing two questions: to what extent can the needed advice be provided? how prepared is the management system to integrate ecosystem advice? We ...
    • Operationalisation of ecosystem services in support of ecosystem-based marine spatial planning: insights into needs and recommendations 

      Galparsoro, Ibon; Pinarbasi, Kemal; Gissi, Elena; Culhane, Fiona; Gacutan, Jordan; Kotta, Jonne; Cabana, David; Wanke, Sonja; Aps, Robert; Bazzucchi, Daniel; Cozzolino, Giacomo; Custodio, Marco; Fetissov, Mihhail; Inacio, Miguel; Jernberg, Susanna; Piazzi, Alessandro; Paudel, Keshav Prasad; Ziemba, Alex; Depellegrin, Daniel (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-06-17)
      Marine or maritime spatial planning (MSP) works across borders and sectors to ensure human activities at sea take place in an efficient and sustainable way. The ecosystem service (ES) concept links ecosystem functioning to human wellbeing and has emerged as a potential framework supporting MSP, as it can be used to link different sectorial and environmental policies. However, due to the complexity ...
    • Bioactivity of a Marine Diatom (Porosira glacialis [Grunow] Jorgensen 1905) Cultivated With and Without Factory Smoke CO2 

      Osvik, Renate Døving; Andersen, Jeanette Hammer; Eilertsen, Hans Christian; Genevière, Anne-Marie; Hansen, Espen Holst (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-02-16)
      Using industrial emissions as a strategy for CO<sub>2</sub> sequestration through carbon capture and utilization (CCU) in cultivation of microalgae can potentially change cultivation factors such as pH, nutrient availability and presence of trace metals, which could alter the growth and metabolism of the microalgae. It is therefore important to investigate whether such changes in culturing conditions ...
    • Are we ready to track climate‐driven shifts in marine species across international boundaries? ‐ A global survey of scientific bottom trawl data 

      Maureaud, Aurore; Frelat, Romain; Pecuchet, Laurène Anne Marie; Shackell, Nancy; Merigot, Bastien; Pinsky, Malin L.; Emblemsvåg, Margrete; Amador, Kofi; Anderson, Sean C.; Arkhipkin, Alexander; Auber, Arnaud; Barri, Ica; Bell, Richard J.; Belmaker, Jonathan; Beukhof, Esther; Camara, Mohamed L.; Guevara-Carrasco, Renato; Choi, Junghwa; Christensen, Helle T.; Conner, Jason; Cubillos, Luis A.; Diadhiou, Hamet D.; Edelist, Dori; Ernst, Billy; Fairweather, Tracey P.; Fock, Heino O.; Friedland, Kevin D.; Garcia, Camilo B.; Gascuel, Didier; Gislason, Henrik; Goren, Menachem; Guitton, Jérôme; Jouffre, Didier; Hattab, Tarek; Hidalgo, Manuel; Kathena, Johannes N.; Knuckey, Ian; Kidé, Saïkou O.; Koen-Alonso, Mariano; Koopman, Matt; Kulik, Vladimir; León, Jacqueline Palacios; Levitt-Barmats, Ya’arit; Lindegren, Martin; Llope, Marcos; Massiot-Granier, Félix; Masski, Hicham; McLean, Matthew; Meissa, Beyah; Mérillet, Laurène; Mihneva, Vesselina; Nunoo, Francis K.E.; O'Driscoll, Richard; Petrova, Elitsa; Ramos, Jorge E.; Refes, Wahid; Román-Marcote, Esther; Siegstad, Helle; Sobrino, Ignacio; Sólmundsson, Jón; Sonin, Oren; Spies, Ingrid; Steingrund, Petur; Stephenson, Fabrice; Stern, Nir; Tserkova, Feriha; Tserpes, Georges; Tzanatos, Evangelos; van Rijn, Itai; van Zwieten, Paul A. M.; Vasilakopoulos, Paraskevas; Yepsen, Daniela V.; Ziegler, Philippe; Thorson, James T.; O'Leary, Cecilia A. (Journal article; Tidsskriftartikkel; Peer reviewed, 2020-10-17)
      Marine biota are redistributing at a rapid pace in response to climate change and shifting seascapes. While changes in fish populations and community structure threaten the sustainability of fisheries, our capacity to adapt by tracking and projecting marine species remains a challenge due to data discontinuities in biological observations, lack of data availability, and mismatch between data and ...
    • Effect of an algal amendment on the microbial conversion of coal to methane at different sulfate concentrations from the Powder River Basin, USA 

      Schweitzer, Hannah; Smith, Heidi J.; Barnhart, Elliott P.; Gerlach, Robin; Fields, Matthew W. (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-09-29)
      Biogenic methane is estimated to account for one-fifth of the natural gas worldwide and there is great interest in controlling methane from different sources. Biogenic coalbed methane (CBM) production relies on syntrophic associations between fermentative bacteria and methanogenic archaea to anaerobically degrade recalcitrant coal and produce methanogenic substrates. However, very little is known ...
    • Exploring Perspectives of the Validity, Legitimacy and Acceptability of Environmental Valuation using Q Methodology 

      Tinch, Rob; Ankamah-Yeboah, Isaac; Armstrong, Claire W. (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-12)
      The extension of market systems and economic appraisal methods to the natural world and allocation of scarce resources is highly controversial and viewed by some as unethical. This has resulted in questions about the appropriate role of valuation and appraisal methods in informing policy and decision-making. We address this issue by assessing the different points of view that exist in marine research, ...
    • Citizens in the Lab: Performance and Validation of eDNA Results 

      Tøttrup, Anders P.; Svenningsen, Lea; Rytter, Maria; Lillemark, Marie Rathcke; Møller, Peter Daniel Rask; Knudsen, Steen Wilhelm (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-12-16)
      Citizen Science has traditionally been applied in biodiversity monitoring, as the approach holds the potential for conducting large-scale data collections. However, involving citizens in more than data collection is still in its infancy. In this paper, we present the results of an ongoing citizen science project that expands the partnership between citizens and researchers by involving citizens in ...
    • Climate Mitigation through Biological Conservation: Extensive and Valuable Blue Carbon Natural Capital in Tristan da Cunha’s Giant Marine Protected Zone 

      Barnes, David K.A.; Bell, James B.; Bridges, Amelia; Ireland, Louise; Howell, Kerry L.; Martin, Stephanie; Sands, Chester J.; Mora Soto, Alejandra; Flint, Gareth; Morley, Simon A.; Souster, Terri (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-12-16)
      Carbon-rich habitats can provide powerful climate mitigation if meaningful protection is put in place. We attempted to quantify this around the Tristan da Cunha archipelago Marine Protected Area. Its shallows (<1000 m depth) are varied and productive. The 5.4 km<sup>2 </sup>of kelp stores ~60 tonnes of carbon (tC) and may export ~240 tC into surrounding depths. In deep-waters we analysed seabed data ...
    • Population genetic structure of a major reef-building coral species Acropora downingi in northeastern Arabian Peninsula 

      Torquato, Felipe; Bouwmeester, Jessica; Range, Pedro; Marshell, Alyssa; Priest, Mark A.; Burt, John A.; Møller, Peter Daniel Rask; Ben-Hamadou, Radhouan (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-08-03)
      Current seawater temperatures around the northeastern Arabian Peninsula resemble future global forecasts as temperatures [35 C are commonly observed in summer. To provide a more fundamental aim of understanding the structure of wild populations in extreme environmental conditions, we conducted a population genetic study of a widespread, regional endemic table coral species, Acropora downingi, ...
    • Formation of Stanley Patch volcanic cone: New insights into the evolution of Deception Island caldera (Antarctica) 

      Hopfenblatt, J.; Geyer, A.; Aulinas, M.; Álvarez-Valero, A.M.; Gisbert, G.; Kereszturi, G.; Ercilla, G.; Gómez-Ballesteros, M.; Márquez, A.; Garcia-Castellanos, Daniel; Pedrazzi, D.; Sumino, H.; Höskuldsson, Ármann; Giralt, S.; Preckler, Carlos Angulo (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-04-16)
      Deception Island (South Shetland Islands) is one of the most active volcanoes in Antarctica, with more than 20 explosive eruptive events registered over the past centuries. Recent eruptions (1967, 1969, and 1970) and volcanic unrest episodes (1992, 1999, and 2014–2015) demonstrate that volcanic activity is likely occurring in the future. This is of special concern for scientists, logistic personnel, ...
    • Antioxidant Activities and Selenogene Transcription in the European Sea Bass (Dicentrarchus labrax) Liver Depend, in a Non-linear Manner, on the Se/Hg Molar Ratio of the Feeds 

      Espino, Marinelle; Eguiraun, Harkaitz; Diaz de Cerio, Oihane; Carrero, José Antonio; Etxebarria, Nestor; Martinez, Iciar (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-07-31)
      Feeding 3.9 and 6.7 mg Hg/kg (Se/Hg molar ratios of 0.8 and 0.4, respectively) for 14 days negatively afected Dicentrarchus labrax growth and total DNTB- and thioredoxin-reductase (TrxR) activities and the transcription of four redox genes (txn1, gpx1, txnrd3, and txnrd2) in the liver, but a diet with 0.5 mg Hg/kg (Se/Hg molar ratio 6.6) slightly increased both reductase activities and the ...
    • Informing a conservation policy-praxis disjuncture: A ‘commons’ perspective to tackling coastal-marine community-conserved area implementation in South Africa 

      Rice, Wayne Stanley; Sowman, Merle; Bavinck, Jan Maarten (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-08-19)
      Conventional ‘people-free’ conservation often fails to deliver both social and ecological outcomes. Communitybased conservation (CBC) – which is underpinned by local community participation, knowledge and priorities – offers a viable alternative in certain contexts. We explore the applicability of established ‘commons’ design principles, and factors enabling community-based conservation, to ...
    • Revision of the 'dragon-head' cusk eels of the genus Porogadus (Teleostei: Ophidiidae), with description of eight new species and one new genus 

      Schwarzhans, Werner W.; Møller, Peter Daniel Rask (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-09-03)
      The ophidiid genus Porogadus occurs between 800 and 5300 m in the tropical and subtropical world oceans. Fifteen nominal species have been described since 1878 and most of them until 1902. The genus has been highlighted as needing revision in recent compilations about ophidiiforms and here we present the first comprehensive review. Twelve of the previously described species are here accepted as valid ...
    • Prospects for Valuation in Marine Decision Making in Europe 

      Tinch, Rob; Hynes, Stephen; Armstrong, Claire W.; Chen, Wenting (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-12)
      There is now high-level recognition that the UN Sustainable Development Goals can only be achieved if the decline of ecosystems and biodiversity can be halted and reversed. This will require effective control of ongoing pressures, meaningful protection and enforcement of protected areas, and significant investments in ecosystem restoration. This paper explores the possible use of economic valuation ...
    • A multi-region and multi-period harvest schedule of the trawl fleet 

      Alizadeh Ashrafi, Tannaz; Ersdal, Anne Mai; Nordli, Anders Samuelsen (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-01-21)
      Under the individual vessel quota regulations, the expected economic return of a multi species fishery is influenced by an array of a multi-component choice such as targeted species, landings per haul, harvesting time and its location. The components of effort allocation decisions are further complicated by changes in the market conditions and the constant movements of fish between spawning and ...
    • Effect of chrysophanic acid on immune response and immune genes transcriptomic profile in Catla catla against Aeromonas hydrophila 

      Harikrishnan, Ramasamy; Devi, Gunapathy; Balasundaram, Chellam; Van Doan, Hien; Jaturasitha, Sanchai; Ringø, Einar; Faggio, Caterina (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-01-12)
      The effect of chrysophanic acid (CA) (2, 4, and 8 mg kg<sup>−1</sup>) on the immunity and immune-related gene profile of Catla catla against Aeromonas hydrophila is reported. In both control and treated groups fed with 2 mg kg<sup>−1</sup> (2 CA), the phagocytosis, hemolytic, myeloperoxidase content, and superoxide anion production decreased significantly between 6th and 8th weeks, whereas when fed ...
    • Long-term welfare effects of repeated warm water treatments on Atlantic salmon (Salmo salar) 

      Moltumyr, Lene; Nilsson, Jonatan; Madaro, Angelico; Seternes, Tore; Rønnestad, Ivar; Stien, Lars Helge (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-10-30)
      Warm water treatment has in recent years become widely used for ridding salmonids of sea lice in aquaculture although the consequences of the treatment for fish welfare are not adequately investigated. The objective of this study was to document potential long-term welfare effects of repeated warm water treatments on Atlantic salmon (Salmo salar). Five weeks after a baseline welfare indicator ...