Viser treff 234-253 av 527

    • High quality draft genome sequence of Streptomyces sp. strain AW19M42 isolated from a sea squirt in Northern Norway 

      Bjerga, Gro Elin Kjæreng; Hjerde, Erik; De Santi, Concetta; Williamson, Adele Kim; Smalås, Arne O.; Willassen, Nils Peder; Altermark, Bjørn (Journal article; Tidsskriftartikkel; Peer reviewed, 2014)
    • A high-throughput, restriction-free cloning and screening strategy based on ccdB-gene replacement 

      Bjerga, Gro Elin Kjæreng; Lund, Bjarte Aarmo; Leiros, Hanna-Kirsti S. (Journal article; Tidsskriftartikkel; Peer reviewed, 2014)
      Background In high-throughput demanding fields, such as biotechnology and structural biology, molecular cloning is an essential tool in obtaining high yields of recombinant protein. Here, we address recently developed restriction-free methods in cloning, and present a more cost-efficient protocol that has been optimized to improve both cloning and clone screening. Results In our case study, ...
    • How accurate is DFT for iridium-mediated chemistry? 

      Hopmann, Kathrin Helen (Journal article; Tidsskriftartikkel; Peer reviewed, 2016-09-27)
      Iridium chemistry is versatile and widespread, with superior performance for reaction types such as enantioselective hydrogenation and C−H activation. In order to gain insight into the mechanistic details of such systems, density functional theory (DFT) studies are often employed. But how accurate is DFT for modeling iridium-mediated transformations in solution? We have evaluated how well DFT ...
    • How does relativity affect magnetically induced currents? 

      Berger, Raphael Johann Friedrich; Repisky, Michal; Komorovsky, Stanislav (Journal article; Tidsskriftartikkel; Peer reviewed, 2015-07-23)
      Magnetically induced probability currents in molecules are studied in relativistic theory. Spin–orbit coupling (SOC) enhances the curvature and gives rise to a previously unobserved current cusp in AuH or small bulge-like distortions in HgH2 at the proton positions. The origin of this curvature is magnetically induced spin-density arising from SOC in the relativistic description.
    • How To Make Your Computational Paper Interesting and Have It Published 

      Hopmann, Kathrin Helen (Journal article; Tidsskriftartikkel; Peer reviewed, 2019-02-11)
      In 1987, the late German chemist Peter Hofmann of the University of Heidelberg wrote: “We still have a long way to go until a computation will be able to compete with or to substitute a lab experiment... one could then conclude that theoretical work in this field—not being quantitatively reliable anyhow—is rather useless, except for the purpose of keeping theorists busy.” However, Hofmann continued: ...
    • A Hybrid of Bacterial Foraging and Differential Evolution -based Distance of Sequences 

      Muhammad Fuad, Muhammad Marwan (Journal article; Tidsskriftartikkel; Peer reviewed, 2014)
    • Hydrogen bond networks of dimethylsulfoxide (DMSO) pentamer 

      Malloum, Alhadji; Conradie, Jeanet (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-10-17)
      Understanding of clusters of dimethylsulfoxide (DMSO) is important in several applications in Chemistry. Despite its importance, very few studies of DMSO clusters, (DMSO)<i><sub>n</i></sub> , have been reported in comparison to systems such as water clusters or methanol clusters. In order to provide further understanding of DMSO clusters, we investigated the structures and non-covalent interactions ...
    • The Hyperporphyrin Concept: A Contemporary Perspective 

      Wamser, Carl C.; Ghosh, Abhik (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-06-30)
      The Gouterman four-orbital model conceptualizes porphyrin UV−visible spectra as dominated by four frontier molecular orbitals-two nearly degenerate HOMOs and two exactly degenerate LUMOS under D<sub>4h</sub> symmetry. These are well separated from all the other molecular orbitals, and normal spectra involve transitions among these MOs. Unusual spectra occur when additional orbitals appear in ...
    • Identification and Cross-Characterisation of Artificial Promoters and 5′ Untranslated Regions in Vibrio natriegens 

      Tietze, Lisa; Hoff, Maria Wilhelmsen; Lale, Rahmi (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-01-27)
      Vibrio natriegens has recently gained attention as a novel fast-growing bacterium in synthetic biology applications. Currently, a limited set of genetic elements optimised for Escherichia coli are used in V. natriegens due to the lack of DNA parts characterised in this novel host. In this study, we report the identification and cross-characterisation of artificial promoters and 5′ untranslated ...
    • The immediate global responses of Aliivibrio salmonicida to iron limitations 

      Thode, Sunniva Katharina; Kahlke, Tim; Robertsen, Espen Mikal; Hansen, Hilde; Haugen, Peik (Journal article; Tidsskriftartikkel, 2015-02-04)
      <i>Background</i>: Iron is an essential micronutrient for all living organisms, and virulence and sequestration of iron in pathogenic bacteria are believed to be correlated. As a defence mechanism, potential hosts therefore keep the level of free iron inside the body to a minimum. In general, iron metabolism is well studied for some bacteria (mostly human or animal pathogens). However, this area ...
    • The impact of interplay between electronic and steric effects on the synthesis and the linear and non-linear optical properties of diketopyrrolopyrrole bearing benzofuran moieties 

      Purc, Anna; Koszarna, Beata; Iachina, Irina; Friese, Daniel Henrik; Tasior, Mariusz; Sobczyk, Krzysztof; Pedzinski, Tomasz; Brewer, Jonathan; Gryko, Daniel T (Journal article; Tidsskriftartikkel; Peer reviewed, 2017-02-07)
      An in-depth investigation of the reaction of substituted salicylaldehydes with chloroacetonitrile led to the development of new conditions for the synthesis of 2-cyanobenzofurans. The crucial improvement lies in the use of phase-transfer catalysis in the second step, i.e., intramolecular aldol type condensation. In a two-step process, the reactants were transformed into a library of 3,6-bis(ben ...
    • Impacts of climate and emission changes on nitrogen deposition in Europe: A multi-model study 

      Simpson, David; Andersson, Camilla; Christensen, Jesper Heile; Engardt, Magnuz; Geels, Camilla; Nyiri, Agnes; Posch, Maximilian; Soares, Joana B.P.; Sofiev, Mikhail; Wind, Peter; Langner, Joakim (Journal article; Tidsskriftartikkel; Peer reviewed, 2014)
    • Implementation of Relativistic Coupled Cluster Theory for Massively Parallel GPU-Accelerated Computing Architectures 

      Pototschnig, Johann V.; Papadopoulos, Anastasios; Lyakh, Dmitry I.; Repisky, Michal; Halbert, Loïc; Gomes, Andre Severo Pereira; Jensen, Hans Jørgen Aa.; Visscher, Lucas (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-08-09)
      In this paper, we report reimplementation of the core algorithms of relativistic coupled cluster theory aimed at modern heterogeneous high-performance computational infrastructures. The code is designed for parallel execution on many compute nodes with optional GPU coprocessing, accomplished via the new ExaTENSOR back end. The resulting ExaCorr module is primarily intended for calculations of molecules ...
    • Improved Buchwald–Hartwig Amination by the Use of Lipids and Lipid Impurities 

      Gevorgyan, Ashot; Hopmann, Kathrin Helen; Bayer, Annette (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-10-25)
      The development of green Buchwald–Hartwig aminations has long been considered challenging, due to the high sensitivity of the reaction to the environment. Here we show that food-grade and waste vegetable oils, triglycerides originating from animals, and natural waxes can serve as excellent green solvents for Buchwald–Hartwig amination. We further demonstrate that amphiphiles and trace ingredients ...
    • Improved CRISPR/Cas9 gene editing by fluorescence activated cell sorting of green fluorescence protein tagged protoplasts 

      Petersen, Bent Larsen; Möller, Svenning Rune; Mravec, Jozef; Jørgensen, Bodil; Christensen, Mikkel; Liu, Ying; Wandall, Hans H.; Bennett, Eric Paul; Yang, Zhang (Journal article; Tidsskriftartikkel; Peer reviewed, 2019-06-17)
      <i>Background</i>: CRISPR/Cas9 is widely used for precise genetic editing in various organisms. CRISPR/Cas9 editing may in many plants be hampered by the presence of complex and high ploidy genomes and inefficient or poorly controlled delivery of the CRISPR/Cas9 components to gamete cells or cells with regenerative potential. Optimized strategies and methods to overcome these challenges are ...
    • Indirect NMR spin-spin coupling constants in diatomic alkali halides 

      Jaszuński, Michał; Antušek, Andrej; Demissie, Taye Beyene; Komorovsky, Stanislav; Repisky, Michal; Ruud, Kenneth (Journal article; Tidsskriftartikkel; Peer reviewed, 2016-12-28)
      We report the Nuclear Magnetic Resonance (NMR) spin–spin coupling constants for diatomic alkali halides MX, where M = Li, Na, K, Rb, or Cs and X = F, Cl, Br, or I. The coupling constants are determined by supplementing the non-relativistic coupled-cluster singles-and-doubles (CCSD) values with relativistic corrections evaluated at the four-component density-functional theory (DFT) level. These ...
    • Influence of Fluorinated Substituents on the Near-Infrared Phosphorescence of 5d Metallocorroles 

      Johannessen, Krister Engedal; Johansen, Martin Amund Langaas; Einrem, Rune Finsås; McCormick McPherson, Laura J.; Alemayehu, Abraham; Borisov, Sergey M.; Ghosh, Abhik (Journal article; Tidsskriftartikkel; Peer reviewed, 2023-07-12)
      The influence of fluorinated substituents on the luminescent properties of rhenium-oxo, osmium-nitrido, and gold triarylcorroles was studied via a comparison of four ligands: triphenylcorrole (TPC), tris(ptrifluoromethylphenyl)corrole (TpCF<sub>3</sub>PC), tris{3,5-bis(trifluoromethyl)- phenyl}corrole (T3,5-CF<sub>3</sub>PC), and tris(pentafluorophenyl)corrole (TPFPC). For each metal series ...
    • The influence of sediment properties and experimental variables on the efficiency of electrodialytic removal of metals from sediment 

      Pedersen, Kristine Bondo; Lejon, Tore; Jensen, Pernille E.; Ottosen, Lisbeth M. (Journal article; Tidsskriftartikkel; Peer reviewed, 2017-10-16)
      <p>Chemometrics was used to determine the influence of sediment properties and experimental settings for the electrodialytic removal (EDR) of Cu, Pb and Zn from six harbour sediments from Greenland and Norway. A Projection onto latent structures (PLS) model revealed that the most important sediment properties for achieving acidification (lag-phase, pH > 4), necessary for desorbing and mobilising ...
    • Infrared Spectroelectrochemistry of Iron-Nitrosyl Triarylcorroles. Implications for Ligand Noninnocence 

      Rahman, Md. Hafizur; Ryan, Michael D.; Vazquez-Lima, Hugo; Alemayehu, Abraham; Ghosh, Abhik (Journal article; Tidsskriftartikkel; Peer reviewed, 2020-02-13)
      Recent DFT calculations have suggested that iron nitrosyl triarylcorrole complexes have substantial {FeNO}<sup>7</sup> −corrole<sup>•2−</sup> character. With this formulation, reduction of Fe(C)(NO) complexes, where C = triarylcorrole, should be centered on the corrole macrocycle rather than on the {FeNO}<sup>7</sup> moiety. To verify this proposition, visible and infrared spectroelectrochemical ...
    • Inhibition of aurora kinase B is important for biologic activity of the dual inhibitors of BCR-ABL and aurora kinases R763/ AS703569 and PHA-739358 in BCR-ABL transformed cells 

      Illert, Anna L; Seitz, Anna K.; Rummelt, Christoph; Kreutmair, Stefanie; Engh, Richard Alan; Goodstal, Samantha; Peschel, Christian; Duyster, Justus; von Bubnoff, Nikolas (Journal article; Tidsskriftartikkel; Peer reviewed, 2014)