Kaspersen, Håkon; Fiskebeck, Eve Marie Louise Zeyl (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-11-29)
A tooL for Prokaryotic Phylogeny And Clustering Analysis (ALPPACA) is a pipeline that
allows both de-novo and reference-based phylogenetic analysis of prokaryotic genomes. The
pipeline provides a suite of analyses tailored for different scenarios, designed to allow analysis
of datasets represented by three different genetic diversity levels, all in one package. These
levels of similarity influence ...