dc.contributor.author | Naseer, Mohammed Umaer | |
dc.contributor.author | Olsson-Liljequist, Barbro | |
dc.contributor.author | Woodford, Neil | |
dc.contributor.author | Dhanji, Hiran | |
dc.contributor.author | Canton, Rafael | |
dc.contributor.author | Sundsfjord, Arnfinn | |
dc.contributor.author | Lindstedt, Bjørn Arne | |
dc.date.accessioned | 2013-03-13T10:04:44Z | |
dc.date.available | 2013-03-13T10:04:44Z | |
dc.date.issued | 2012 | |
dc.description.abstract | One hundred E. coli isolates from Norway (n = 37), Sweden (n = 24), UK (n = 20) and Spain (n = 19), producing CTX-M-type - (n = 84), or SHV-12 (n = 4) extended spectrum β-lactamases, or the plasmid mediated AmpC, CMY-2 (n = 12), were typed using multi-locus sequence typing (MLST) and multi-locus variable number of tandem repeat analysis (MLVA). Isolates clustered into 33 Sequence Types (STs) and 14 Sequence Type Complexes (STCs), and 58 MLVA-Types (MTs) and 25 different MLVA-Type Complexes (MTCs). A strong agreement between the MLST profile and MLVA typing results was observed, in which all ST131-isolates (n = 39) and most of the STC-648 (n = 10), STC-38 (n = 9), STC-10 (n = 9), STC-405 (n = 8) and STC-23 (n = 6) isolates were clustered distinctly into MTC-29, -36, -20, -14, -10 and -39, respectively. MLVA is a rapid and accurate tool for genotyping isolates of globally disseminated virulent multidrug resistant E. coli lineages, including ST131. | en |
dc.identifier.citation | PLoS ONE (2012), vol. 7(7): e41232. | en |
dc.identifier.cristinID | FRIDAID 963768 | |
dc.identifier.doi | http://dx.doi.org/10.1371/journal.pone.0041232 | |
dc.identifier.issn | 1932-6203 | |
dc.identifier.uri | https://hdl.handle.net/10037/4968 | |
dc.identifier.urn | URN:NBN:no-uit_munin_4707 | |
dc.language.iso | eng | en |
dc.publisher | Public Library of Science (PLoS) | en |
dc.rights.accessRights | openAccess | |
dc.subject | VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710::Medical molecular biology: 711 | en |
dc.subject | VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710::Medisinsk molekylærbiologi: 711 | en |
dc.subject | VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710::Medical microbiology: 715 | en |
dc.subject | VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710::Medisinsk mikrobiologi: 715 | en |
dc.subject | VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710::Medical immunology: 716 | en |
dc.subject | VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710::Medisinsk immunologi: 716 | en |
dc.title | Multi-Locus variable number of tandem repeat analysis for rapid and accurate typing of virulent multidrug resistant escherichia coli clones | en |
dc.type | Journal article | en |
dc.type | Tidsskriftartikkel | en |
dc.type | Peer reviewed | en |