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dc.contributor.authorFellows Yates, James A.
dc.contributor.authorAndrades Valtueña, Aida
dc.contributor.authorVågene, Åshild J
dc.contributor.authorCribdon, Becky
dc.contributor.authorVelsko, Irina M.
dc.contributor.authorBorry, Maxime
dc.contributor.authorBravo-Lopez, Miriam J.
dc.contributor.authorFernandez-Guerra, Antonio
dc.contributor.authorGreen, Eleanor J.
dc.contributor.authorRamachandran, Shreya L.
dc.contributor.authorHeintzman, Peter D.
dc.contributor.authorSpyrou, Maria A.
dc.contributor.authorHübner, Alexander
dc.contributor.authorGancz, Abigail S.
dc.contributor.authorHider, Jessica
dc.contributor.authorAllshouse, Aurora F.
dc.contributor.authorZaro, Valentina
dc.contributor.authorWarinner, Christina
dc.date.accessioned2021-10-22T13:09:09Z
dc.date.available2021-10-22T13:09:09Z
dc.date.issued2021-01-26
dc.description.abstractAncient DNA and RNA are valuable data sources for a wide range of disciplines. Within the field of ancient metagenomics, the number of published genetic datasets has risen dramatically in recent years, and tracking this data for reuse is particularly important for large-scale ecological and evolutionary studies of individual taxa and communities of both microbes and eukaryotes. AncientMetagenomeDir (archived at <a href=https://doi.org/10.5281/zenodo.3980833>https://doi.org/10.5281/zenodo.3980833</a>) is a collection of annotated metagenomic sample lists derived from published studies that provide basic, standardised metadata and accession numbers to allow rapid data retrieval from online repositories. These tables are community-curated and span multiple sub-disciplines to ensure adequate breadth and consensus in metadata definitions, as well as longevity of the database. Internal guidelines and automated checks facilitate compatibility with established sequence-read archives and term-ontologies, and ensure consistency and interoperability for future meta-analyses. This collection will also assist in standardising metadata reporting for future ancient metagenomic studies.en_US
dc.identifier.citationFellows Yates JA, Andrades Valtueña, Vågene ÅJ, Cribdon, Velsko IM, Borry, Bravo-Lopez, Fernandez-Guerra A, Green, Ramachandran, Heintzman PD, Spyrou, Hübner, Gancz, Hider, Allshouse, Zaro, Warinner C. Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir. Scientific Data. 2021;8en_US
dc.identifier.cristinIDFRIDAID 1929063
dc.identifier.doi10.1038/s41597-021-00816-y
dc.identifier.issn2052-4463
dc.identifier.urihttps://hdl.handle.net/10037/22806
dc.language.isoengen_US
dc.publisherSpringer Natureen_US
dc.relation.journalScientific Data
dc.relation.projectIDinfo:eu-repo/grantAgreement/EC/H2020/678901/EU/Transformations of Food in the Eastern Mediterranean Late Bronze Age/FoodTransforms/en_US
dc.relation.projectIDinfo:eu-repo/grantAgreement/EC/H2020/670518/EU/Europe’s Lost Frontiers: exploring climate change, settlement and colonisation of the submerged landscapes of the North Sea basin using ancient DNA, seismic mapping and complex systems modelling/Lost Frontiers/en_US
dc.relation.projectIDinfo:eu-repo/grantAgreement/EC/H20207/771234/EU/Human health and migration in prehistory/PALEoRIDER/en_US
dc.rights.accessRightsopenAccessen_US
dc.rights.holderCopyright 2021 The Author(s)en_US
dc.subjectVDP::Mathematics and natural science: 400::Basic biosciences: 470::Genetics and genomics: 474en_US
dc.subjectVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474en_US
dc.titleCommunity-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDiren_US
dc.type.versionpublishedVersionen_US
dc.typeJournal articleen_US
dc.typeTidsskriftartikkelen_US
dc.typePeer revieweden_US


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