BioTIME: A database of biodiversity time series for the Anthropocene

Permanent lenke
https://hdl.handle.net/10037/13873
DOI
https://doi.org/10.1111/geb.12729
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Publisher's version (PDF)
Dato
2018-07-24
Type
Journal article
Tidsskriftartikkel
Peer reviewed

Forfatter
Dornelas, Maria; Antao, Laura H.; Moyes, Faye; Bates, Amanda E.; Magurran, Anne E.; Adam, Dusan; Akhmetzhanova, Asem A.; Appeltans, Ward; Arcos, Jose Manuel; Arnold, Haley; Ayyappan, Narayanan; Badihi, Gal; Baird, Andres H.; Barbosa, Miguel; Barreto, Tiago Egydio; Bässler, Claus; Bellgrove, Alecia; Belmaker, Jonathan; Benedetti-Cecchi, Lisandro; Bett, Brian J.; Bjorkman, Anne D.; Błazewicz, Magdalena; Blowes, Shane A.; Bloch, Christopher P.; Bonebrake, Timothy C.; Boyd, Susan; Bradford, Matt; Brooks, Andrew J.; Brown, James H.; Bruelheide, Helge; Budy, Phaedra; Carvalho, Fernando; Castaneda-Moya, Edward; Chen, Chaolun Allen; Chamblee, John F.; Chase, Tory J.; Collier, Laura Siegwart; Cooper, Elisabeth J.; Cornelissen, J. Hans C.; Cotano, Unai; Crow, Shannan Kyle; Damasceno, Gabriella; Davies, Claire H.; Davis, Robert A.; Day, Frank P.; Degraer, Steven; Doherty, Tim S.; Dunn, Timothy E.; Durigan, Giselda; Duffy, J. Emmett; Edelist, Dor; Edgar, Graham J.; Elahi, Robin; Elmendorf, Sarah C.; Enemar, Anders; Ernest, S. K. Morgan; Escribano, Rubén; Estiarte, Marc; Evans, Brian S.; Fan, Tung-Yun; Farah, Fabiano Turini; Fernandes, Luiz Loureiro; Fábio, Z. Farneda; Fidelis, Alessandra; Fitt, Robert; Fosaa, Anna Maria; Franco, Geraldo Antonio Daher Correa; Frank, Grace E.; Fraser, William R.; García, Hernando; Gatti, Roberto Cazzolla; Givan, Or; Gorgone-Barbosa, Elizabeth; Gould, William A.; Gries, Corinna; Grossman, Gary D.; Gutierréz, Julio R.; Hale, Stephen; Harmon, Mark E.; Harte, John; Haskins, Gary; Henshaw, Donald L.; Hermanutz, Luise; Hidalgo, Pamela; Higuchi, Pedro; Hoey, Andrew; Hoey, Gert Van; Hofgaard, Annika; Holeck, Kristen; Hollister, Robert D.; Holmes, Richard; Hoogenboom, Mia; Hsieh, Chih-hao; Hubbell, Stephen P.; Huettmann, Falk; Huffard, Christine L.; Hurlbert, Allen H.; Ivanauskas, Natália Macedo; Janík, David; Jandt, Ute; Jazdzewska, Anna; Johannessen, Tore; Johnstone, Jill; Jones, Julia; Jones, Faith A. M.; Kang, Jungwon; Kartawijaya, Tasrif; Keeley, Erin C.; KElt, Douglas A.; Kinnear, Rebecca; Klanderud, Kari; Knutsen, Halvor; Koenig, Christopher C.; Kortz, Alessandra R.; Král, KAmil; Kuhnz, Linda A.; Kuo, Chao-Yang; Kushner, David J.; Laguionie-Marchais, Claire; Lancaster, Lesley T.; Lee, Cheol Min; Lefcheck, Jonathan S.; Lévesque, Esther; Lightfoot, DAvid; Lloret, Francisco; Lloyd, John D.; López-Baucells, Adrià; Louzao, Maite; Madin, Joshua S.; Magnússon, BorgÞór; Malmud, Shahar; Matthews, Iain; McFarland, Kent P.; McGill, Brian; McKnight, Diane; McLarney, William O.; Meador, Jason; Meserve, Peter L.; Metcalfe, Daniel J.; Meyer, Christoph F. J.; Michelsen, Anders; Milchakova, Nataliya; Moens, Tom; Moland, Even; Moore, Jon; Moreira, Carolina Mathias; Müller, Jörg; Murphy, Grace; Myers-Smith, Isla H.; Myster, Randall W.; Naumov, Andrew; Neat, Francis; Nelson, James A.; Nelson, Michael Paul; Newton, Stephen F.; Norden, Natalia; Oliver, Jeffrey C.; Olsen, Esben M.; Onipchenko, Vladimir G.; Pabis, Krzysztof; Pabst, Robert J.; Paquette, Alain; Pardede, Sinta; Paterson, David M.; Péllisier, Raphaël; Peñuelas, Josep; Pérez-Matus, Alejandro; Pizarro, Oscar; Pomati, Francesco; Post, Eric; Prins, Herbert H. T.; Priscu, John C.; Provoost, Pieter; Prudic, Kathleen L.; Pulliainen, Erkki; Ramesh, B. R.; Ramos, Olivia Mendivil; Rassweiler, Andrew; Rebelo, Jose Eduardo; Reed, Daniel C.; Reich, Peter B.; Remillard, Suzanne M.; Richardson, Anthony J.; Richardson, J. Paul; Rijn, Itai van; Rocha, Ricardo; Rivera-Monroy, Victor H.; Rixen, Christian; Robinson, Kevin P.; Rodrigues, Ricardo Ribeiro; Rossa-Feres, Denise de Cerqueira; Rudstam, Lars; Ruhl, Henry; Ruz, Catalina S.; Sampaio, Erica M.; Rybicki, Nancy; Rypel, Andrew; Sal, Sofia; Salgado, Beatriz; Santos, Flavio A. M.; Savassi-Coutinho, Ana Paula; Scanga, Sara; Schmidt, Jochen; Schooley, Robert; Setiawan, Fakhrizal; Shao, Kwang-Tsao; Shaver, Gaius R.; Sherman, Sally; Sherry, Thomas W.; Sicinski, Jacek; Sievers, Caya; Silva, Ana Carolina da; Silva, Fernando Rodrigues da; Silveira, Fabio L.; Slingsby, Jasper; Smart, Tracey; Snell, Sara J.; Soudzilovskaia, Nadejda A.; Souza, Gabriel B. G.; Souza, Flaviana Maluf; Souza, Vinícius Castro; Stallings, Christopher D.; Stanforth, Rowan; Stanley, Emily H.; Sterza, José Mauro; Stevens, Maarten; Stuart-Smith, Rick; Suarez, Yzel Rondon; Supp, Sarah; Tamashiro, Jorge Yoshio; Tarigan, Sukmaraharja; Thieda, Gary P.; Thorn, Simon; Tolvanen, Anne; Toniato, Maria Teresa Zugliani; Totland, Ørjan; Twilley, Robert R.; Vaitkus, Gediminas; Valdivia, Nelson; Vallejo, Martha Isabel; Valone, Thomas J.; Colen, Carl Van; Vanaverbeke, Jan; Venturoli, Fabio; Verheye, Hans M.; Vianna, Marcelo; Vieira, Rui P.; Vrska, Tomás; Vu, Con Quang; Vu, Lien Van; Waide, Robert B.; Waldock, Conor; Watts, Dave; Webb, Sara; Wesolowski, Tomasz; White, Ethan P.; Widdicombe, Claire E.; Wilgers, Dustin; Williams, Richard; Williams, Stefan B.; Williamson, Mark; Willig, Michael R.; Willis, Trevor J.; Wipf, Sonja; Woods, Kerry D.; Woehler, Eric J.; Zawada, Kyle; Zettler, Michael L.
Sammendrag

Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.

Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record.

Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2).

Time period and grain: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year.

Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.

Software format: .csv and .SQL.

Beskrivelse
This is the peer reviewed version of the following article: Dornelas, M., Antão, L.H., Moyes, F., Bates, A.E., Magurran, A.E., Adam, D., ... Zettler, M.L. (2018). BioTIME: A database of biodiversity time series for the Anthropocene. Global Ecology and Biogeography, 27(7), 760-786. https://doi.org/10.1111/geb.12729, which has been published in final form at https://doi.org/10.1111/geb.12729. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions.
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Wiley
Sitering
Dornelas, M., Antão, L.H., Moyes, F., Bates, A.E., Magurran, A.E., Adam, D., ... Zettler, M.L. (2018). BioTIME: A database of biodiversity time series for the Anthropocene. Global Ecology and Biogeography, 27(7), 760-786. https://doi.org/10.1111/geb.12729
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