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dc.contributor.advisorJaakola, Laura
dc.contributor.authorSamkumar, Amos
dc.date.accessioned2021-11-17T10:11:15Z
dc.date.available2021-11-17T10:11:15Z
dc.date.issued2021-12-09
dc.description.abstractBerries are abundant in bioactive compounds. Bilberry or European blueberry (<i>Vaccinium myrtillus</i> L.) is in particular gaining worldwide attention being one of the best natural sources of antioxidant rich phenolics that accumulate in both skin and flesh during fruit ripening. Alongside, the ubiquitous presence of anthocyanins and related flavonoids, it also contains other compounds such as carotenoids, stilbenes, terpenoids, vitamins and sugars. Especially flavonoids and sugars have major effect of fruit quality. Beside the genetic adaptation by the latitude-based cultivars and ecotypes, altering environmental conditions play a major role in determining the bioavailability of these compounds. Especially, the light quality impacts several secondary metabolic processes, thus by interacting with the number of known positive regulators and repressors of light signaling. The thesis is focused on understanding the biosynthesis and regulatory mechanisms of the key quality compounds, flavonoids and sugars, in bilberry in response to different light qualities from the photosynthetically active radiation (PAR) spectrum. The light quality experiments were carried out in controlled conditions by mimicking single wavelength light spectra of red, blue and far-red using LED-light systems. The promising results showed that indeed supplemental light wavelengths have a positive effect on anthocyanin and sugar biosynthesis in bilberries. Especially, delphinidins were found to be the most reactive class of anthocyanins in response to red light treatments, which increased the concentration several fold in fully ripe berries. The transcriptomic data revealed that the abscisic acid (ABA) biosynthesis and signaling was found to regulate the anthocyanin accumulation, where even the ABA degrading enzyme, ABA-8'-hydroxylase, acted as positive signaling factor. However, the results showed a differential effect or opposite response pattern towards red and blue light in berries which are ripening independently of mother plant to that of naturally attached ripening berries. Interestingly, the blue light influenced the anthocyanin biosynthesis in detached berries to the most, and resulted in highest anthocyanin levels quantified in fully ripe bilberries. The study also showed the effect of light quality on sugar metabolism from the differentially expressed genes (DEGs) data, where both red and blue light influenced the starch and sucrose metabolism. Supplemental red light also increased the amount of sugars in ripe bilberry. The findings of this study will drive-forward the plant research communities towards better understanding on the effect of light on fruit ripening and improving quality. The results can also be further utilized in future commercial breeding programs or cultivation practices of wild <i>Vaccinium</i> berries with improved value-added properties.en_US
dc.description.doctoraltypeph.d.en_US
dc.description.popularabstractWild Berries in the Nordics are abundant in bioactive compounds such as anthocyanins and related flavonoids. Bilberry or European blueberry (Vaccinium myrtillus L.), in particular have gained worldwide attention being one of the best natural sources of antioxidant rich phenolics. Fruit quality and marketability is determined by the bioavailability of such phenolic compounds and flavor enhancing sugars. Environmental conditions such as light quality has a major role in determining the composition and accumulation of these compounds. The current study showed the effect of different light quality such as red and blue wavelengths on flavonoids and sugar metabolism using high-throughput transcriptomics data and metabolite analyses from simulated controlled experiments. The findings of this study will drive-forward the fruit-research communities towards better understanding on the effect of light on ripening and improving berry quality with value-added properties.en_US
dc.description.sponsorshipUniversity of Tromsø (UiT), Faculty of Biosciences, Fisheries and Economics (BFE) PhD research grant and UiT- BFE faculty's PhD student mobility grant for research stay abroaden_US
dc.identifier.isbn978-82-8266-207-9
dc.identifier.urihttps://hdl.handle.net/10037/23030
dc.language.isoengen_US
dc.publisherUiT The Arctic University of Norwayen_US
dc.publisherUiT Norges arktiske universiteten_US
dc.relation.haspart<p>Paper I: Samkumar, A., Jones, D., Karppinen, K., Dare, A.P., Sipari, N., Espley, R.V., Martinussen, I. & Jaakola, L. (2021). Red and blue light treatments of ripening bilberry fruits reveal differences in signalling through abscisic acid-regulated anthocyanin biosynthesis. <i>Plant, Cell & Environment, 44</i>(10), 3227– 3245. Also available in Munin at <a href=https://hdl.handle.net/10037/23018> https://hdl.handle.net/10037/23018</a>. <p>Paper II: Samkumar, A., Karppinen, K., McGhie, T.K., Espley, R.V., Martinussen, I. & Jaakola, L. Flavonoid biosynthesis is differentially altered in detached and naturally ripening attached bilberries in response to spectral light quality. (Submitted manuscript). <p>Paper III: Samkumar, A., Karppinen, K., Dhakal, B., Martinussen, I. & Jaakola, L. Insights into sugar metabolism during bilberry (<i>Vaccinium myrtillus</i> L.) fruit development. (Submitted manuscript).en_US
dc.relation.isbasedonThe data that support the findings of this thesis are openly available in NCBI-SRA database at <a href=http://www.ncbi.nlm.nih.gov/bioproject/747684>http://www.ncbi.nlm.nih.gov/bioproject/747684</a>, reference number [PRJNA747684].en_US
dc.rights.accessRightsopenAccessen_US
dc.rights.holderCopyright 2021 The Author(s)
dc.rights.urihttps://creativecommons.org/licenses/by-nc-sa/4.0en_US
dc.rightsAttribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)en_US
dc.subjectVDP::Agriculture and fishery disciplines: 900::Agriculture disciplines: 910en_US
dc.subjectVDP::Landbruks- og Fiskerifag: 900::Landbruksfag: 910en_US
dc.titleEffect of light quality on the biosynthesis of flavonoids and sugars in bilberry (Vaccinium myrtillus L.)en_US
dc.typeDoctoral thesisen_US
dc.typeDoktorgradsavhandlingen_US


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