Blar i forfatter Det helsevitenskapelige fakultet "Haverkamp, Thomas Hendricus Augustus"

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    • Complete Genome Sequences of 12 Quinolone-Resistant Escherichia coli Strains Containing qnrS1 Based on Hybrid Assemblies 

      Kaspersen, Håkon; Haverkamp, Thomas Hendricus Augustus; Ilag, Hanna Karin; Øines, Øivind; Sekse, Camilla; Slettemeås, Jannice Schau (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-01-28)
      In total, 12 quinolone-resistant <i>Escherichia coli</i> (QREC) strains containing <i>qnrS1</i> were submitted to long-read sequencing using a FLO-MIN106 flow cell on a MinION device. The long reads were assembled with short reads (Illumina) and analyzed using the MOB-suite pipeline. Six of these QREC genome sequences were closed after hybrid assembly.