Complete Genome Sequences of 12 Quinolone-Resistant Escherichia coli Strains Containing qnrS1 Based on Hybrid Assemblies

Permanent lenke
https://hdl.handle.net/10037/21430
DOI
https://doi.org/10.1128/MRA.01190-20
Thumbnail
Åpne
Publisert versjon (PDF)
Dato
2021-01-28
Type
Journal article
Tidsskriftartikkel
Peer reviewed

Forfatter
Kaspersen, Håkon; Haverkamp, Thomas Hendricus Augustus; Ilag, Hanna Karin; Øines, Øivind; Sekse, Camilla; Slettemeås, Jannice Schau
Sammendrag
In total, 12 quinolone-resistant Escherichia coli (QREC) strains containing qnrS1 were submitted to long-read sequencing using a FLO-MIN106 flow cell on a MinION device. The long reads were assembled with short reads (Illumina) and analyzed using the MOB-suite pipeline. Six of these QREC genome sequences were closed after hybrid assembly.
Forlag
American Society for Microbiology
Sitering
Kaspersen, Haverkamp, Ilag, Øines, Sekse, Slettemeås. Complete Genome Sequences of 12 Quinolone-Resistant Escherichia coli Strains Containing qnrS1 Based on Hybrid Assemblies. Microbiology Resource Announcements (MRA). 2021
Metadata
Vis full innførsel
Samlinger
Copyright 2021 The Author(s)