Complete Genome Sequences of 12 Quinolone-Resistant Escherichia coli Strains Containing qnrS1 Based on Hybrid Assemblies
AuthorKaspersen, Håkon; Haverkamp, Thomas Hendricus Augustus; Ilag, Hanna Karin; Øines, Øivind; Sekse, Camilla; Slettemeås, Jannice Schau
In total, 12 quinolone-resistant Escherichia coli (QREC) strains containing qnrS1 were submitted to long-read sequencing using a FLO-MIN106 flow cell on a MinION device. The long reads were assembled with short reads (Illumina) and analyzed using the MOB-suite pipeline. Six of these QREC genome sequences were closed after hybrid assembly.