Viser treff 577-596 av 930

    • Minimal Interspecies Interaction Adjustment (MIIA): inference of member-dependent interactions in microbiomes 

      Song, Hyun-Seob; Lee, Joon-Yong; Haruta, Shin; Nelson, William C.; Lee, Dong-Yup; Lindemann, Stephen R.; Fredrickson, Jim K.; Bernstein, Hans Christopher (Journal article; Tidsskriftartikkel; Peer reviewed, 2019-06-11)
      An intriguing aspect in microbial communities is that pairwise interactions can be influenced by neighboring species. This creates context dependencies for microbial interactions that are based on the functional composition of the community. Context dependent interactions are ecologically important and clearly present in nature, yet firmly established theoretical methods are lacking from many modern ...
    • Mitochondrial Cytochrome Oxidase Subunit 1: A Promising Molecular Marker for Species Identification in Foraminifera 

      Girard, Elsa B.; Langerak, Anouk; Jompa, Jamaluddin; Wangensteen, Owen S.; Macher, Jan-Niklas; Renema, Willem (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-02-02)
      Traditional morphological methods for species identification are highly time consuming, especially for small organisms, such as Foraminifera, a group of shell-building microbial eukaryotes. To analyze large amounts of samples more efficiently, species identification methods have extended to molecular tools in the last few decades. Although a wide range of phyla have good markers available, for ...
    • Mitogenomic evidence of population differentiation of thorny skate, Amblyraja radiata, in the North Atlantic 

      Denton, John S. S.; Kneebone, Jeff; Yang, Lei; Lynghammar, Arve; McElroy, David; Corrigan, Shannon; Jakobsdóttir, Klara; Miri, Carolyn; Simpson, Mark; Naylor, Gavin J. P. (Journal article; Tidsskriftartikkel; Peer reviewed, 2024-02-25)
      Management of thorny skate (Amblyraja radiata) in the Northwest Atlantic has posed a conservation dilemma for several decades due to the species' lack of response to strong conservation efforts in the US Gulf of Maine and the Canadian Scotian Shelf, confusion over the relationship between two reproductive size morphs of differing life histories that are sympatric in the Northwest Atlantic, and ...
    • Modelling gear and fishers size selection for escapees, discards, and landings: a case study in Mediterranean trawl fisheries 

      Mytilineou, Chryssi; Herrmann, Bent; Mantopoulou-Palouka, Danai; Sala, Antonello; Megalofonou, Persefoni (Journal article; Tidsskriftartikkel; Peer reviewed, 2018-04-19)
      Gear selectivity and discards are important issues related to fisheries management but separately modelled. This work examines for the first time the overall size-selection pattern on the total amount of individuals of a species entering the trawl codend. An innovative approach was used based on modelling the escapement through the codend in the sea and the subsequently selection process by the ...
    • Molecular gut content analysis of different spider body parts 

      Macías-Hernández, Nuria; Athey, Kacie; Tonzo, Vanina; Wangensteen Fuentes, Owen Simon; Arnedo, Miquel A.; Harwood, James D. (Journal article; Tidsskriftartikkel; Peer reviewed, 2018-05-30)
      Molecular gut-content analysis has revolutionized the study of food webs and feeding interactions, allowing the detection of prey DNA within the gut of many organisms. However, successful prey detection is a challenging procedure in which many factors affect every step, starting from the DNA extraction process. Spiders are liquid feeders with branched gut diverticula extending into their legs and ...
    • Molecular tools prove little auks from Svalbard are extremely selective for Calanus glacialis even when exposed to Atlantification 

      Balazy, Kaja; Trudnowska, Emilia; Wojczulanis-Jakubas, Katarzyna; Jakubas, Dariusz; Præbel, Kim; Choquet, Marvin; Brandner, Melissa Michelle; Schultz, Mads; Bitz-Thorsen, Julie; Boehnke, Rafał; Szeligowska, Marlena; Descamps, Sebastien; Strøm, Hallvard; Blachowiak-Samolyk, Kasia (Journal article; Tidsskriftartikkel; Peer reviewed, 2023-08-22)
      Two Calanus species, C. glacialis and C. finmarchicus, due to different life strategies and environmental preferences act as an ecological indicators of Arctic Atlantification. Their high lipid content makes them important food source for higher trophic levels of Arctic ecosystems including the most abundant Northern Hemisphere's seabird, the little auk (Alle alle). Recent studies indicate a critical ...
    • Monitoring bacterial community dynamics in a drinking water treatment plant: an integrative approach using metabarcoding and microbial indicators in large water volumes 

      Pinar-Méndez, Anna; Wangensteen, Owen S.; Præbel, Kim; Galofré, Belén; Méndez, Javier; Blanch, Anicet R.; García-Aljaro, Cristina (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-04-30)
      Monitoring bacterial communities in a drinking water treatment plant (DWTP) may help to understand their regular operations. Bacterial community dynamics in an advanced full-scale DWTP were analyzed by 16S rRNA metabarcoding, and microbial water quality indicators were determined at nine different stages of potabilization: river water and groundwater intake, decantation, sand filtration, ozonization, ...
    • Monitoring of environmental DNA from nonindigenous species of algae, dinoflagellates and animals in the North East Atlantic 

      Knudsen, Steen Wilhelm; Hesselsøe, Martin; Thaulow, Jens; Agersnap, Sune; Hansen, Brian Klitgaard; Jacobsen, Magnus Wulff; Bekkevold, Dorte; Jensen, Søren K.S.; Møller, Peter Daniel Rask; Andersen, Jesper Harbo (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-01-14)
      Monitoring the distribution of marine non-indigenous species is a challenging task. To support this monitoring, we developed and validated the specificity of 12 primer-probe assays for detection of environmental DNA (eDNA) from marine species all non-indigenous to Europe. The species include sturgeons, a Pacific red algae, oyster thief, a freshwater hydroid from the Black Sea, Chinese mitten crab, ...
    • More Than Expected From Old Sponge Samples: A Natural Sampler DNA Metabarcoding Assessment of Marine Fish Diversity in Nha Trang Bay (Vietnam) 

      Turon, Marta; Angulo-Preckler, Carlos; Antich, Adrià; Præbel, Kim; Wangensteen, Owen S. (Journal article; Tidsskriftartikkel; Peer reviewed, 2020-12-09)
      Sponges have recently been proposed as ideal candidates to act as natural samplers for environmental DNA due to their efficiency in filtering water. However, validation of the usefulness of DNA recovered from sponges to reveal vertebrate biodiversity patterns in Marine Protected Areas is still needed. Additionally, nothing is known about how different sponge species and morphologies influence the ...
    • Morphological update on Calycina marina (Pezizellaceae, Helotiales, Leotiomycetes), a new combination for Laetinaevia marina 

      Baral, Hans-Otto; Rämä, Teppo (Journal article; Tidsskriftartikkel; Peer reviewed, 2015-11-05)
      Laetinaevia marina is a frequent ascomycetous fungus that is widely distributed on the seashores of Scandinavia and Great Britain. It grows on fronds of Fucales (Phaeophyceae) that are washed ashore and lie decaying at the high tide mark or further up on the beach. It is one of the few described marine discomycetes. In the current generic concept it is regarded as a member of Naevioideae ...
    • Motivation for learning statistics: An example from fishery and aquaculture science 

      Sønvisen, Signe Annie (Journal article; Tidsskriftartikkel; Peer reviewed, 2023-04-15)
      Teaching statistics to generalist students oriented toward a profession, rather than academic merits, may be challenging. As statistics courses also tend to have a low student appeal, tailoring a course toward this type of audience is demanding. Framed within the theory of statistical thinking and literacy, this article shows how an investigative process, using domain data and real-life examples, ...
    • MPA in Labor: Securing the Pearl Cays of Nicaragua 

      Gonzalez, Clarence; Jentoft, Svein (Journal article; Tidsskriftartikkel; Peer reviewed, 2011)
      Implementation of Marine Protected Areas (MPAs) has always a step-zero, i.e., an initial phase when the idea is incepted, communicated and negotiated among stakeholders. What happens during this phase is likely to have an impact later on. If not done right, the management of the MPA may encounter problems at later stage that will be difficult to correct. Inspired by this working theory, this article ...
    • MPA in Labour: Securing the Pearl Cays of Nicaragua 

      Jentoft, Svein; Gonzalez, Clarence (Journal article; Tidsskriftartikkel; Peer reviewed, 2010)
    • Mucin induces CRISPR-Cas defense in an opportunistic pathogen 

      de Freitas Almeida, Gabriel Magno; Hoikkala, Ville; Ravantti, Janne; Rantanen, Noora; Sundberg, Lotta-Riina (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-06-25)
      Mucin induces CRISPR-Cas defense in an opportunistic pathogen
    • Mucosal and systemic physiological changes underscore the welfare risks of environmental hydrogen sulphide in post-smolt Atlantic salmon (Salmo salar) 

      Lazado, Carlo C.; Stiller, Kevin Torben; Timmerhaus, Gerrit; Reiten, Britt Kristin Megård; Nicolaysen, Ilona Lorraine; Carletto, Danilo; Alipio, Hanna Ross De Dios; Hansen-Bergstedt, Julie; Andersen, Øivind (Journal article; Tidsskriftartikkel; Peer reviewed, 2024-01-04)
      Atlantic salmon (Salmo salar) might encounter toxic hydrogen sulphide (H<sub>2</sub>S) gas during aquaculture production. Exposure to this gas can be acute or chronic, with heightened levels often linked to significant mortality rates. Despite its recognised toxicity, our understanding of the physiological implications of H<sub>2</sub>S on salmon remains limited. This report details the mucosal and ...
    • Mucosal Environment Induces Phage Susceptibility in Streptococcus mutans 

      Sundberg, Lotta-Riina; Rantanen, Noora; de Freitas Almeida, Gabriel Magno (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-09-19)
      Pathogenic bacteria are attracted toward mucosa, as it is their way of entry into the body. However, we know surprisingly little about the phage-bacterium interactions in the mucosal environment. Here, we explored the effect of the mucosal environment on growth characteristics and phage-bacterium interactions in Streptococcus mutans, a causative agent of dental caries. We found that although mucin ...
    • A multi-region and multi-period harvest schedule of the trawl fleet 

      Alizadeh Ashrafi, Tannaz; Ersdal, Anne Mai; Nordli, Anders Samuelsen (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-01-21)
      Under the individual vessel quota regulations, the expected economic return of a multi species fishery is influenced by an array of a multi-component choice such as targeted species, landings per haul, harvesting time and its location. The components of effort allocation decisions are further complicated by changes in the market conditions and the constant movements of fish between spawning and ...
    • Multidisciplinary perspectives on living marine resources in the Arctic 

      Kvamsdal, Sturla Furunes; Dankel, Dorothy Jane; Ekerhovd, Nils-Arne; Hoel, Alf Håkon; Renner, Angelika; Sandø, Anne Britt; Steinshamn, Stein Ivar (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-10-20)
      Many areas in the Arctic are vulnerable to the impacts of climate change. We observe large-scale effects on physical, biological, economic and social parameters, including ice cover, species distributions, economic activity and regional governance frameworks. Arctic living marine resources are affected in various ways. A holistic understanding of these effects requires a multidisciplinary enterprise. ...
    • MultiSEPT - Full scale tests of the semicircular spreading gear (SCSG) 

      Grimaldo, Eduardo; Sistiaga, Manu Berrondo; Larsen, Roger B.; Tatone, Ivan; Olsen, fredrik (Research report; Forskningsrapport, 2013-06-24)
      This reportdescribes full scale tests at sea with the semi-circular spreading gear (SCSG). This activity is part of Work Package 3 (WP3: Development of new ground gear) of the MultiSEPT project. The spreading of the SCSG and rockhopper gear was measured by useof MARPORT distance sensors. Bottom contact was monitored by use of SCANMARtrawl sensors and by underwater cameras mounted in the headline ...
    • Musculoskeletal symptoms among workers in the commercial fishing fleet of Norway 

      Sandsund, Mariann; Øren, Anita; Thorvaldsen, Trine; Holmen, Ingunn; Sønvisen, Signe; Heidelberg, Cecilie Thon; Aasmoe, Lisbeth (Journal article; Tidsskriftartikkel; Peer reviewed, 2019-06-25)
      <i>Background</i>: Fishers exposed to unfavourable environmental conditions may suffer negative health ef- fects. This study aimed to identify musculoskeletal symptoms in professional fishers in Norway using data from several sources; register data, telephone survey and questionnaire.<p> <p><i>Materials and methods</i>: Professional fishers (n = 25,971) registered in the period 2008-2013 were ...